Fast traveled to the Animal Shelter safe house and found the exit closed:
I had triggered a bounty before fast travel, and had to fast travel out of the safe house to complete it. The rogue NPC music also started playing when I tried to get out of the safe house, and continued for the remainder of that session in NY, but I never encountered any rogues.
Additional info:
- Golden Bullet is enabled.
- There were two other agents in the safe house, both low level 30+. One was running around as if they were trying to find a way out.
- The door to the safe house was open when I walked back in, and remained open the next time I fast traveled to the safe house.
- This is on PC, and was immediately after completing a "verify files" operation. It's the first time it's happened to me, but I think there have been other threads discussing the same issue.